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DJ40_2306 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_2306" - tonB_Cterm: TonB family C-terminal domain protein in Yersinia pseudotuberculosis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_2306tonB_Cterm- TonB family C-terminal domain protein (267 aa)    
Predicted Functional Partners:
exbB
TonB complex protein; exbB- tonB-system energizer ExbB (343 aa)
 
 
  0.924
exbD
exbD_1- TonB system transport protein ExbD (143 aa)
 
 
  0.897
tolQ
tolQ- protein TolQ (228 aa)
   
 
  0.757
fcuA
annotation not available (758 aa)
   
 
  0.745
feoB
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system (771 aa)
   
   
  0.735
prsE
type_I_hlyD- type I secretion membrane fusion , HlyD family protein (442 aa)
 
     
  0.731
tolR
tolR- protein TolR (142 aa)
   
 
  0.724
ompA
annotation not available (353 aa)
     
 
  0.690
hxuC_2
Hemin receptor; tonB-hemlactrns- TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein (676 aa)
 
 
  0.672
hasD
ABC transporter; type_I_sec_PrtD- type I secretion system ATPase family protein (602 aa)
 
          0.646
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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