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DJ40_232 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_232" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_232annotation not available (511 aa)    
Predicted Functional Partners:
DJ40_226
UPF0229 protein ERS008480_00952; Belongs to the UPF0229 family (424 aa)
 
 
  0.989
DJ40_225
prkA serine kinase C-terminal domain protein (644 aa)
 
   
  0.984
DJ40_3722
Uncharacterized conserved protein (112 aa)
     
        0.768
uspB
annotation not available (111 aa)
     
        0.718
yohC
annotation not available (196 aa)
     
        0.666
psiF
annotation not available (111 aa)
     
        0.664
wrbA
NAD(P)H dehydrogenase (quinone); NAD(P)H-quinone oxidoreductase, type IV; flav_wrbA- NAD(P)H-quinone oxidoreductase, type IV; Belongs to the WrbA family (199 aa)
     
        0.653
ygiW
annotation not available (137 aa)
     
   
  0.624
dps
DNA protection during starvation protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co- crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction (167 aa)
     
        0.615
yhcO
Putative ribonuclease inhibitor (93 aa)
     
        0.608
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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