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ligK protein (Yersinia pseudotuberculosis) - STRING interaction network
ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ligKligK_PcmE- 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase (237 aa)    
Predicted Functional Partners:
DJ40_2344
annotation not available (245 aa)
 
   
    0.997
mcl1
annotation not available (280 aa)
       
  0.904
ilvB_1
Acolac_lg- acetolactate synthase, large subunit, biosynthetic type (555 aa)
       
    0.901
ilvG
Acolac_lg- acetolactate synthase, large subunit, biosynthetic type (548 aa)
       
    0.901
ilvI
Acolac_lg- acetolactate synthase, large subunit, biosynthetic type (575 aa)
       
    0.901
DJ40_89
annotation not available (115 aa)
         
    0.900
ilvM
annotation not available (85 aa)
         
    0.900
ilvH
Acolac_sm- acetolactate synthase, small subunit (164 aa)
         
    0.900
lysR1
annotation not available (392 aa)
 
          0.893
DJ40_384
annotation not available (289 aa)
 
     
  0.817
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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