STRINGSTRING
cpxA protein (Yersinia pseudotuberculosis) - STRING interaction network
"cpxA" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpxAannotation not available (458 aa)    
Predicted Functional Partners:
cpxR
annotation not available (232 aa)
  0.999
cpxP
annotation not available (162 aa)
 
     
  0.935
nlpE
annotation not available (227 aa)
     
 
  0.921
baeR
annotation not available (239 aa)
 
  0.820
ompR
annotation not available (239 aa)
 
  0.812
phoP_2
annotation not available (223 aa)
 
 
 
  0.764
copR
annotation not available (230 aa)
 
 
  0.678
phoP_1
annotation not available (235 aa)
 
 
 
  0.660
dcrB
annotation not available (175 aa)
   
     
  0.653
cpxR1_1
annotation not available (227 aa)
 
 
  0.639
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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