STRINGSTRING
ntrC protein (Yersinia pseudotuberculosis) - STRING interaction network
ntrC: nitrogen regulation protein NR in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ntrCntrC- nitrogen regulation protein NR (470 aa)    
Predicted Functional Partners:
glnL
annotation not available (349 aa)
  0.995
rpoN
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (477 aa)
 
     
  0.819
barA
annotation not available (939 aa)
   
 
  0.776
DJ40_2587
annotation not available (851 aa)
   
 
  0.685
yehU
annotation not available (565 aa)
   
     
  0.629
arcB
annotation not available (778 aa)
   
 
  0.616
glnA
glnA- glutamine synthetase, type I (469 aa)
   
   
  0.612
hnr
Regulator of RpoS; Regulates the turnover of the sigma S factor (RpoS) by promoting its proteolysis in exponentially growing cells. Acts by binding and delivering RpoS to the ClpXP protease. RssB is not co- degraded with RpoS, but is released from the complex and can initiate a new cycle of RpoS recognition and degradation (338 aa)
 
 
   
  0.597
gabR
annotation not available (501 aa)
           
  0.592
gntR
annotation not available (312 aa)
           
  0.592
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
Server load: low (9%) [HD]