STRINGSTRING
kup protein (Yersinia pseudotuberculosis) - STRING interaction network
"kup" - Low affinity potassium transport system protein kup in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kupLow affinity potassium transport system protein kup; Responsible for the low-affinity transport of potassium into the cell, with the probable concomitant uptake of protons (symport system) (622 aa)    
Predicted Functional Partners:
acnB
acnB- aconitate hydratase 2; Belongs to the aconitase/IPM isomerase family (865 aa)
           
  0.594
hrpB
DEAH_box_HrpB- ATP-dependent helicase HrpB (829 aa)
         
  0.593
gltA
cit_synth_I- citrate (Si)-synthase; Belongs to the citrate synthase family (426 aa)
           
  0.593
pgi
annotation not available (548 aa)
           
  0.592
gap
GAPDH-I- glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (331 aa)
           
  0.591
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (612 aa)
           
  0.582
kefB
Glutathione-regulated potassium-efflux system protein KefB; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport (602 aa)
 
 
 
  0.577
kdpD
annotation not available (907 aa)
         
  0.533
kdpA
Potassium-transporting ATPase potassium-binding subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane (562 aa)
         
  0.483
trkA
annotation not available (458 aa)
         
  0.471
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
Server load: low (9%) [HD]