STRINGSTRING
viaA protein (Yersinia pseudotuberculosis) - STRING interaction network
"viaA" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
viaAannotation not available (488 aa)    
Predicted Functional Partners:
ravA
ATPase RavA; Functions as an ATPase. May play a role in metal insertion (metal-chelatase) or as a chaperone (507 aa)
   
  0.988
yijD
annotation not available (135 aa)
   
          0.602
frsA
annotation not available (415 aa)
   
          0.599
ggt
Gamma-glutamyltranspeptidase; G_glut_trans- gamma-glutamyltransferase (587 aa)
           
  0.595
rseP
annotation not available (451 aa)
           
  0.583
DJ40_1955
Protein of uncharacterised function (DUF1107) (70 aa)
   
          0.576
DJ40_3474
UPF0325 protein ERS008480_01527; Belongs to the UPF0325 family (129 aa)
   
          0.543
DJ40_2469
Conserved hypothetical protein (103 aa)
   
        0.530
DJ40_2470
Protein YidR; Dipeptidyl peptidase IV (DPP IV) N-terminal region family protein (104 aa)
   
        0.526
sgrR
HTH-type transcriptional regulator SgrR; Activates the small RNA gene sgrS under glucose- phosphate stress conditions as well as yfdZ. Represses its own transcription under both stress and non-stress conditions. Might act as a sensor of the intracellular accumulation of phosphoglucose by binding these molecules in its C-terminal solute-binding domain (553 aa)
   
          0.519
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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