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DJ40_2446 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_2446" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_2446annotation not available (223 aa)    
Predicted Functional Partners:
epaO
spaO_YscQ- type III secretion apparatus protein, YscQ/HrcQ family (320 aa)
   
 
      0.468
fliY_2
annotation not available (284 aa)
              0.455
DJ40_3292
annotation not available (3103 aa)
   
          0.450
tadG
annotation not available (518 aa)
   
          0.430
DJ40_1221
Uncharacterized protein (542 aa)
   
          0.424
DJ40_1730
DUF2285 domain-containing protein (247 aa)
   
          0.419
phoU
Phosphate-specific transport system accessory protein PhoU; Part of the phosphate (Pho) regulon, which plays a key role in phosphate homeostasis. PhoU is essential for the repression of the Pho regulon at high phosphate conditions (240 aa)
              0.417
DJ40_2452
annotation not available (206 aa)
   
          0.415
DJ40_3069
annotation not available (367 aa)
   
          0.412
DJ40_965
annotation not available (141 aa)
   
          0.411
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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