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DJ40_2469 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_2469" - Conserved hypothetical protein in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_2469Conserved hypothetical protein (103 aa)    
Predicted Functional Partners:
DJ40_2470
Protein YidR; Dipeptidyl peptidase IV (DPP IV) N-terminal region family protein (104 aa)
          0.995
DJ40_3291
Protein YggN (244 aa)
   
        0.693
DJ40_2471
Putative lipoprotein (112 aa)
   
   
  0.681
ompA
annotation not available (353 aa)
 
 
  0.659
DJ40_61
annotation not available (904 aa)
   
          0.658
ynfB
UPF0482 protein ERS008480_00660; Belongs to the UPF0482 family (123 aa)
   
          0.629
ycdY
annotation not available (186 aa)
   
          0.579
tolA
Cell envelope integrity inner membrane protein TolA; tolA_full- protein TolA (388 aa)
 
 
      0.566
ydgK
annotation not available (147 aa)
   
          0.565
ynfD
DUF1161 domain-containing protein (81 aa)
   
          0.564
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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