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ghrB protein (Yersinia pseudotuberculosis) - STRING interaction network
"ghrB" - Glyoxylate/hydroxypyruvate reductase B in Yersinia pseudotuberculosis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ghrBGlyoxylate/hydroxypyruvate reductase B; Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively (326 aa)    
Predicted Functional Partners:
idnK
Gluconokinase; Therm_gnt_kin- carbohydrate kinase, thermoresistant glucokinase family protein (167 aa)
   
 
  0.947
gntK_1
Gluconokinase; Therm_gnt_kin- carbohydrate kinase, thermoresistant glucokinase family protein (178 aa)
   
 
  0.925
gloA
glyox_I- lactoylglutathione lyase (135 aa)
   
  0.919
eda
annotation not available (213 aa)
       
  0.912
aceA
Isocit_lyase- isocitrate lyase (435 aa)
         
  0.912
aceB
malate_syn_A- malate synthase A (532 aa)
     
 
  0.911
glxK
annotation not available (378 aa)
   
 
    0.908
gph_2
PGP_bact- phosphoglycolate phosphatase, bacterial (232 aa)
   
 
    0.904
ghrB_1
annotation not available (316 aa)
   
   
 
0.835
tdcB
annotation not available (320 aa)
     
 
  0.805
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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