STRINGSTRING
yibL protein (Yersinia pseudotuberculosis) - STRING interaction network
"yibL" - Protein of uncharacterised function in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yibLProtein of uncharacterised function (DUF2810) (118 aa)    
Predicted Functional Partners:
mtlR
annotation not available (184 aa)
 
        0.731
DJ40_2491
annotation not available (40 aa)
              0.685
cpxP
annotation not available (162 aa)
   
          0.565
ygbE
annotation not available (105 aa)
   
          0.537
DJ40_627
Nucleoprotein/polynucleotide-associated enzyme (179 aa)
   
        0.525
atpI
annotation not available (127 aa)
   
          0.523
ydhC
annotation not available (121 aa)
   
     
  0.517
tomB
annotation not available (122 aa)
   
          0.461
pgpB
annotation not available (253 aa)
   
          0.444
ybcJ
Putative RNA-binding protein (70 aa)
       
 
  0.443
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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