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fdnG protein (Yersinia pseudotuberculosis) - STRING interaction network
"fdnG" - formate-DH-alph: formate dehydrogenase, alpha subunit in Yersinia pseudotuberculosis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdnGformate-DH-alph- formate dehydrogenase, alpha subunit (803 aa)    
Predicted Functional Partners:
fdoI
formate-DH-gamm- formate dehydrogenase, gamma subunit (224 aa)
 
  0.999
fdxH
FDH-beta- formate dehydrogenase, beta subunit (323 aa)
  0.999
DJ40_2498
annotation not available (195 aa)
  0.998
fdhE
Protein FdhE homolog; Necessary for formate dehydrogenase activity (309 aa)
 
 
  0.998
selA
L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis; Belongs to the SelA family (462 aa)
 
     
  0.949
selB
selB- selenocysteine-specific translation elongation factor (657 aa)
 
     
  0.948
dmsB_2
DMSO_dmsB- dimethylsulfoxide reductase, chain B (205 aa)
 
  0.941
dmsB_1
DMSO_dmsB- dimethylsulfoxide reductase, chain B (205 aa)
 
  0.938
fghA
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde (280 aa)
       
  0.909
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) (282 aa)
       
    0.903
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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