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fdhE protein (Yersinia pseudotuberculosis) - STRING interaction network
"fdhE" - Protein FdhE homolog in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdhEProtein FdhE homolog; Necessary for formate dehydrogenase activity (309 aa)    
Predicted Functional Partners:
fdnG
formate-DH-alph- formate dehydrogenase, alpha subunit (803 aa)
 
 
  0.998
fdoI
formate-DH-gamm- formate dehydrogenase, gamma subunit (224 aa)
 
  0.992
fdxH
FDH-beta- formate dehydrogenase, beta subunit (323 aa)
 
 
  0.985
DJ40_2498
annotation not available (195 aa)
 
 
 
  0.964
selA
L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis; Belongs to the SelA family (462 aa)
 
   
  0.914
selB
selB- selenocysteine-specific translation elongation factor (657 aa)
 
        0.910
fdhD
Sulfur carrier protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH (274 aa)
 
 
 
  0.775
DJ40_3850
annotation not available (189 aa)
   
 
  0.626
modE
annotation not available (263 aa)
 
     
  0.599
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP (348 aa)
 
     
  0.577
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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