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DJ40_2513 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_2513" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_2513annotation not available (327 aa)    
Predicted Functional Partners:
fimC10
Pili assembly chaperone PapD, C-terminal domain protein (255 aa)
 
      0.852
fimA7
annotation not available (185 aa)
 
          0.845
yqiG
Outer membrane fimbrial usher porin; papC N-terminal domain protein (819 aa)
 
 
  0.770
DJ40_3236
Conserved hypothetical protein (702 aa)
   
          0.503
yebF
annotation not available (136 aa)
   
          0.496
DJ40_3234
Protein of uncharacterised function (DUF3274) (703 aa)
   
          0.488
hdeD
annotation not available (189 aa)
   
          0.476
DJ40_1218
Membrane protein (735 aa)
   
          0.446
dmsC1
annotation not available (286 aa)
   
          0.442
csgD
annotation not available (194 aa)
   
 
      0.423
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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