STRINGSTRING
xylG protein (Yersinia pseudotuberculosis) - STRING interaction network
"xylG" - Xylose import ATP-binding protein XylG in Yersinia pseudotuberculosis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylGXylose import ATP-binding protein XylG; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family (510 aa)    
Predicted Functional Partners:
xylH
annotation not available (394 aa)
 
  0.992
xylF
xylF- D-xylose ABC transporter, D-xylose-binding protein (331 aa)
 
  0.968
btr
annotation not available (397 aa)
 
        0.734
araH
annotation not available (302 aa)
   
  0.664
rbsC1
annotation not available (334 aa)
   
  0.627
rbsC_2
annotation not available (332 aa)
   
  0.604
rbsC_7
annotation not available (330 aa)
   
  0.600
rbsC_9
annotation not available (327 aa)
 
        0.563
rbsC_8
annotation not available (342 aa)
        0.538
yjfF
annotation not available (330 aa)
   
  0.535
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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