STRINGSTRING
nreB protein (Yersinia pseudotuberculosis) - STRING interaction network
"nreB" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nreBannotation not available (509 aa)    
Predicted Functional Partners:
uhpA
annotation not available (196 aa)
  0.994
uhpC
annotation not available (443 aa)
 
  0.966
DJ40_625
annotation not available (209 aa)
 
  0.717
nreC
annotation not available (210 aa)
 
      0.589
eptB
annotation not available (563 aa)
              0.549
narP_1
annotation not available (209 aa)
 
 
  0.526
ivy
annotation not available (169 aa)
   
          0.490
bvgA
annotation not available (210 aa)
 
      0.485
barA
annotation not available (939 aa)
         
  0.485
ydfZ
annotation not available (67 aa)
   
          0.414
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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