STRINGSTRING
shlB_4 protein (Yersinia pseudotuberculosis) - STRING interaction network
"shlB_4" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
shlB_4annotation not available (587 aa)    
Predicted Functional Partners:
DJ40_2549
adhes_NPXG- filamentous hemagglutinin family N-terminal domain protein (463 aa)
 
   
  0.907
DJ40_2971
annotation not available (270 aa)
   
  0.788
DJ40_2960
Adhesin; adhes_NPXG- filamentous hemagglutinin family N-terminal domain protein (2750 aa)
 
   
  0.759
fhaB_2
annotation not available (747 aa)
 
   
  0.758
fhaB_1
annotation not available (499 aa)
   
  0.743
DJ40_2961
annotation not available (600 aa)
 
   
  0.676
DJ40_2551
annotation not available (68 aa)
              0.652
feuB
annotation not available (319 aa)
     
        0.459
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (191 aa)
     
        0.456
kdpB
Potassium-transporting ATPase ATP-binding subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily (688 aa)
     
        0.454
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
Server load: low (16%) [HD]