STRINGSTRING
bcsZ protein (Yersinia pseudotuberculosis) - STRING interaction network
"bcsZ" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bcsZannotation not available (371 aa)    
Predicted Functional Partners:
motB_2
annotation not available (303 aa)
       
 
  0.627
hydN
annotation not available (185 aa)
           
  0.596
fdhF
Fdh-alpha- formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family (715 aa)
           
  0.594
slp
Slp- outer membrane lipo, Slp family protein (201 aa)
           
  0.593
stp
Stp- serine transporter family protein (433 aa)
           
  0.582
usg
annotation not available (336 aa)
           
  0.580
dppF
oligo_HPY- oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein; Belongs to the ABC transporter superfamily (358 aa)
              0.547
dppD
oligo_HPY- oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein; Belongs to the ABC transporter superfamily (326 aa)
              0.547
yhjK
annotation not available (671 aa)
         
  0.541
dppC
annotation not available (300 aa)
              0.529
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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