STRINGSTRING
yhjK protein (Yersinia pseudotuberculosis) - STRING interaction network
"yhjK" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhjKannotation not available (671 aa)    
Predicted Functional Partners:
dosC
HmsT protein; GGDEF- diguanylate cyclase domain protein (384 aa)
 
  0.921
barA
annotation not available (939 aa)
 
  0.841
adrA
PAS/PAC domain-containing protein; GGDEF- diguanylate cyclase domain protein (693 aa)
 
  0.817
DJ40_2587
annotation not available (851 aa)
 
  0.786
torS
annotation not available (939 aa)
 
  0.775
arcB
annotation not available (778 aa)
 
  0.768
cheA
annotation not available (718 aa)
 
 
  0.764
bdlA
annotation not available (434 aa)
 
 
  0.717
cph2
GGDEF- diguanylate cyclase domain protein (855 aa)
 
 
0.699
rcsC
Sensor histidine kinase RcsC; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB (949 aa)
 
 
  0.688
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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