STRINGSTRING
kdgK protein (Yersinia pseudotuberculosis) - STRING interaction network
"kdgK" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kdgKannotation not available (314 aa)    
Predicted Functional Partners:
eda
annotation not available (213 aa)
 
  0.976
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate (397 aa)
 
   
  0.956
edd
Edd- phosphogluconate dehydratase; Belongs to the IlvD/Edd family (638 aa)
 
 
  0.928
uxaA
annotation not available (496 aa)
 
   
  0.917
DJ40_4216
kduD- 2-deoxy-D-gluconate 3-dehydrogenase (253 aa)
  0.863
rpe
Rpe- ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family (225 aa)
   
  0.844
kduD_1
kduD- 2-deoxy-D-gluconate 3-dehydrogenase (251 aa)
 
  0.844
araB
L-ribulokinase- L-ribulokinase; Belongs to the ribulokinase family (567 aa)
       
  0.801
uxuR
annotation not available (247 aa)
 
 
 
  0.655
por
annotation not available (490 aa)
 
     
  0.623
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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