STRINGSTRING
dmpI protein (Yersinia pseudotuberculosis) - STRING interaction network
"dmpI" - Tautomerase in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dmpITautomerase; Taut- 4-oxalocrotonate tautomerase enzyme family protein (66 aa)    
Predicted Functional Partners:
yhjD
annotation not available (366 aa)
            0.761
yqjC
annotation not available (126 aa)
 
            0.734
yhjH
annotation not available (281 aa)
              0.511
hpaH
hpaH- 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (267 aa)
         
  0.479
trpC
annotation not available (475 aa)
         
  0.448
kdgK
annotation not available (314 aa)
              0.437
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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