STRINGSTRING
DJ40_2572 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_2572" - Conserved hypothetical protein in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_2572Conserved hypothetical protein (166 aa)    
Predicted Functional Partners:
DJ40_2571
Conserved hypothetical family protein (258 aa)
 
          0.965
DJ40_2274
Uncharacterized protein (292 aa)
 
          0.789
DJ40_713
Conserved hypothetical family protein (371 aa)
 
          0.769
DJ40_3292
annotation not available (3103 aa)
   
          0.726
DJ40_2792
Conserved hypothetical protein (152 aa)
   
          0.724
DJ40_2784
Conserved hypothetical protein (152 aa)
   
          0.724
DJ40_1928
annotation not available (294 aa)
   
          0.719
DJ40_2213
annotation not available (393 aa)
   
          0.716
DJ40_1730
DUF2285 domain-containing protein (247 aa)
   
          0.699
DJ40_3069
annotation not available (367 aa)
   
          0.692
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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