STRINGSTRING
prtA protein (Yersinia pseudotuberculosis) - STRING interaction network
"prtA" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prtAannotation not available (444 aa)    
Predicted Functional Partners:
hasD
ABC transporter; type_I_sec_PrtD- type I secretion system ATPase family protein (602 aa)
 
   
  0.826
prsE
type_I_hlyD- type I secretion membrane fusion , HlyD family protein (442 aa)
 
   
  0.774
lytM
annotation not available (438 aa)
           
  0.603
pepA
Probable cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides; Belongs to the peptidase M17 family (503 aa)
         
  0.597
shlA
annotation not available (1423 aa)
 
     
  0.595
envC
annotation not available (456 aa)
           
  0.583
mbtB_2
High molecular weight siderophore biosynthesis protein; AA-adenyl-dom- amino acid adenylation domain protein (3889 aa)
 
     
  0.569
aroG
Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) (350 aa)
           
  0.550
pheA2
Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate (186 aa)
   
          0.535
tadG
annotation not available (518 aa)
 
 
 
  0.514
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
Server load: low (17%) [HD]