STRINGSTRING
ydjH_2 protein (Yersinia pseudotuberculosis) - STRING interaction network
"ydjH_2" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydjH_2annotation not available (335 aa)    
Predicted Functional Partners:
DJ40_2591
ATP synthase subunit delta (227 aa)
 
          0.948
DJ40_2592
annotation not available (286 aa)
   
  0.935
DJ40_2587
annotation not available (851 aa)
 
          0.845
rbsB_7
annotation not available (314 aa)
 
          0.828
rbsC_14
annotation not available (330 aa)
 
          0.691
ompR_2
Transcriptional regulatory , C terminal family protein (245 aa)
   
          0.660
nagE
PTS-II-BC-nag- PTS system, N-acetylglucosamine-specific IIBC component (677 aa)
         
  0.589
rbsA
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family (507 aa)
 
          0.579
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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