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DJ40_2625 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_2625" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_2625annotation not available (89 aa)    
Predicted Functional Partners:
DJ40_3535
Protein of uncharacterised function (DUF2002) (111 aa)
   
          0.750
DJ40_1821
Putative glycoprotein/receptor (163 aa)
   
          0.731
DJ40_1968
Conserved hypothetical protein (103 aa)
   
          0.705
DJ40_4051
Lipoprotein (110 aa)
   
        0.699
ybjP
Putative lipoprotein (191 aa)
   
          0.694
DJ40_606
annotation not available (77 aa)
   
          0.692
flk
Flagellar regulator flk; Acts as a regulator of flagellar gene expression by modulating the protein level of the anti sigma factor FlgM upon sensing ring completion or hook elongation. Flk could inhibit FlgM secretion by acting as a braking system for the flagellar- associated type III secretion system (345 aa)
   
          0.642
tsgA
annotation not available (394 aa)
   
          0.610
ompX
annotation not available (174 aa)
   
        0.594
DJ40_4137
annotation not available (80 aa)
   
        0.584
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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