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trpS protein (Yersinia pseudotuberculosis) - STRING interaction network
trpS: tryptophan--tRNA ligase in Yersinia pseudotuberculosis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
trpStrpS- tryptophan--tRNA ligase (346 aa)    
Predicted Functional Partners:
rpe
Rpe- ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family (225 aa)
 
   
  0.952
gph_2
PGP_bact- phosphoglycolate phosphatase, bacterial (232 aa)
 
   
  0.951
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) (362 aa)
 
   
  0.890
pheT
pheT_bact- phenylalanine--tRNA ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily (795 aa)
   
   
  0.879
argS
argS- arginine--tRNA ligase (576 aa)
   
   
  0.842
glnS
glnS- glutamine--tRNA ligase (555 aa)
   
   
  0.821
cysS
cysS- cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family (461 aa)
   
   
  0.808
leuS
leuS_bact- leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family (860 aa)
   
   
  0.782
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily (675 aa)
   
   
  0.778
dam_1
annotation not available (271 aa)
     
  0.774
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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