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yccS_1 protein (Yersinia pseudotuberculosis) - STRING interaction network
"yccS_1" - YCCS_YHJK: integral membrane , YccS/YhfK family protein in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yccS_1YCCS_YHJK- integral membrane , YccS/YhfK family protein (706 aa)    
Predicted Functional Partners:
DJ40_3535
Protein of uncharacterised function (DUF2002) (111 aa)
   
          0.715
cap
annotation not available (210 aa)
              0.682
DJ40_3678
annotation not available (448 aa)
   
          0.606
yhfA
annotation not available (135 aa)
         
  0.601
DJ40_2625
annotation not available (89 aa)
   
          0.576
bhsA_1
Multiple stress resistance protein BhsA (87 aa)
   
        0.570
DJ40_1530
Putative salt-induced outer membrane protein (255 aa)
   
          0.568
DJ40_606
annotation not available (77 aa)
   
          0.565
DJ40_3662
annotation not available (231 aa)
   
          0.488
DJ40_554
annotation not available (969 aa)
   
        0.475
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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