STRINGSTRING
rfaQ_2 protein (Yersinia pseudotuberculosis) - STRING interaction network
"rfaQ_2" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfaQ_2annotation not available (192 aa)    
Predicted Functional Partners:
DJ40_2678
annotation not available (148 aa)
          0.995
rfaE
Bifunctional protein HldE; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose; In the N-terminal section; belongs to the carbohydrate kinase PfkB family (476 aa)
   
   
  0.638
tps_1
annotation not available (806 aa)
 
          0.620
hyaD
annotation not available (329 aa)
         
  0.604
pelY
annotation not available (572 aa)
   
          0.540
yohK
annotation not available (231 aa)
     
        0.529
DJ40_3670
annotation not available (355 aa)
 
          0.493
DJ40_3448
Membrane protein (156 aa)
   
          0.492
DJ40_2184
Alpha-related fimbriae usher protein (777 aa)
   
          0.490
DJ40_1811
annotation not available (410 aa)
 
   
  0.488
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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