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DJ40_2783 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_2783" - vgr_GE: Rhs element Vgr family protein in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_2783vgr_GE- Rhs element Vgr family protein (739 aa)    
Predicted Functional Partners:
wapA_3
RHS/YD repeat-containing protein; Rhs_assc_core- RHS repeat-associated core domain protein (1422 aa)
   
  0.902
DJ40_2781
annotation not available (1177 aa)
 
   
  0.889
DJ40_2776
Putative membrane protein Aec26; IV_VI_DotU- type IV/VI secretion system , DotU family domain protein (250 aa)
 
   
  0.884
DJ40_2775
Type VI secretion protein (448 aa)
 
   
  0.877
DJ40_2772
Type VI secretion protein (362 aa)
 
        0.857
DJ40_2782
impA-related N-terminal family protein (437 aa)
 
          0.857
DJ40_2771
Type VI secretion protein (606 aa)
 
   
  0.850
DJ40_2784
Conserved hypothetical protein (152 aa)
   
        0.849
DJ40_2773
FHA-domain-containing protein (438 aa)
 
          0.848
DJ40_2774
annotation not available (181 aa)
 
        0.842
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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