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wapA_3 protein (Yersinia pseudotuberculosis) - STRING interaction network
"wapA_3" - RHS/YD repeat-containing protein in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wapA_3RHS/YD repeat-containing protein; Rhs_assc_core- RHS repeat-associated core domain protein (1422 aa)    
Predicted Functional Partners:
DJ40_2784
Conserved hypothetical protein (152 aa)
 
   
  0.963
DJ40_2783
vgr_GE- Rhs element Vgr family protein (739 aa)
   
  0.902
DJ40_2786
Conserved hypothetical protein (205 aa)
              0.834
DJ40_2782
impA-related N-terminal family protein (437 aa)
              0.780
DJ40_2792
Conserved hypothetical protein (152 aa)
 
   
  0.774
DJ40_1723
Type VI secretion protein (327 aa)
 
        0.594
mbtB_2
High molecular weight siderophore biosynthesis protein; AA-adenyl-dom- amino acid adenylation domain protein (3889 aa)
 
 
 
  0.592
DJ40_2781
annotation not available (1177 aa)
 
        0.583
DJ40_3855
Conserved hypothetical protein (282 aa)
   
          0.580
DJ40_1729
impA-related N-terminal family protein (328 aa)
 
          0.572
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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