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DJ40_2801 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_2801" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_2801annotation not available (299 aa)    
Predicted Functional Partners:
afr_2
annotation not available (376 aa)
 
   
  0.971
hdhA
annotation not available (688 aa)
 
     
  0.706
aroP
annotation not available (465 aa)
     
   
  0.604
pgm
Pgm- phosphoglucomutase, alpha-D-glucose phosphate-specific (547 aa)
           
  0.592
DJ40_2990
annotation not available (145 aa)
   
          0.588
DJ40_4172
annotation not available (740 aa)
   
          0.540
yadA_4
annotation not available (716 aa)
   
          0.513
DJ40_1725
annotation not available (147 aa)
   
          0.509
DJ40_99
Putative lipoprotein (217 aa)
 
          0.461
ycjS
annotation not available (337 aa)
 
   
  0.444
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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