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araG_5 protein (Yersinia pseudotuberculosis) - STRING interaction network
"araG_5" - ccmA: heme ABC exporter, ATP-binding protein CcmA in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araG_5ccmA- heme ABC exporter, ATP-binding protein CcmA (498 aa)    
Predicted Functional Partners:
rbsC_11
annotation not available (317 aa)
   
  0.965
rbsC_12
annotation not available (329 aa)
        0.965
fggy
annotation not available (545 aa)
 
          0.888
rbsB13
annotation not available (329 aa)
 
      0.840
kpsF
annotation not available (201 aa)
 
          0.825
lsrD_2
annotation not available (345 aa)
   
  0.740
rbsC_4
annotation not available (365 aa)
 
   
  0.695
rbsC_10
annotation not available (329 aa)
        0.687
rbsC_5
annotation not available (340 aa)
        0.669
lsrB_3
annotation not available (334 aa)
 
      0.555
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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