STRINGSTRING
rbsC_12 protein (Yersinia pseudotuberculosis) - STRING interaction network
"rbsC_12" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsC_12annotation not available (329 aa)    
Predicted Functional Partners:
araG_5
ccmA- heme ABC exporter, ATP-binding protein CcmA (498 aa)
        0.965
fggy
annotation not available (545 aa)
          0.888
rbsC_11
annotation not available (317 aa)
 
       
0.888
rbsB13
annotation not available (329 aa)
        0.858
kpsF
annotation not available (201 aa)
 
          0.834
araG_4
annotation not available (504 aa)
        0.746
mglA5
annotation not available (525 aa)
        0.678
lsrB_3
annotation not available (334 aa)
        0.629
rbsB_5
annotation not available (319 aa)
 
        0.601
mglA_3
annotation not available (499 aa)
        0.550
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
Server load: low (13%) [HD]