STRINGSTRING
pcp2 protein (Yersinia pseudotuberculosis) - STRING interaction network
"pcp2" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcp2annotation not available (155 aa)    
Predicted Functional Partners:
DJ40_3980
Conserved hypothetical protein (102 aa)
   
          0.686
elaB_1
DUF883 domain-containing protein (101 aa)
   
          0.660
yfeA
annotation not available (322 aa)
         
  0.611
surE
5’/3’-nucleotidase SurE; Nucleotidase with a broad substrate specificity as it can dephosphorylate various ribo- and deoxyribonucleoside 5’- monophosphates and ribonucleoside 3’-monophosphates with highest affinity to 3’-AMP. Also hydrolyzes polyphosphate (exopolyphosphatase activity) with the preference for short-chain- length substrates (P20-25). Might be involved in the regulation of dNTP and NTP pools, and in the turnover of 3’-mononucleotides produced by numerous intracellular RNases (T1, T2, and F) during the degradation of various RNAs (254 aa)
           
  0.594
nlpD
annotation not available (327 aa)
           
  0.594
DJ40_730
VI_ClpV1- type VI secretion ATPase, ClpV1 family (880 aa)
           
  0.592
clpV1_2
ClpB protein; VI_ClpV1- type VI secretion ATPase, ClpV1 family; Belongs to the ClpA/ClpB family (885 aa)
           
  0.592
clpV1_4
VI_ClpV1- type VI secretion ATPase, ClpV1 family (882 aa)
           
  0.592
DJ40_3192
VI_ClpV1- type VI secretion ATPase, ClpV1 family (882 aa)
           
  0.592
clpV1_3
VI_ClpV1- type VI secretion ATPase, ClpV1 family; Belongs to the ClpA/ClpB family (867 aa)
           
  0.592
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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