STRINGSTRING
yqjC protein (Yersinia pseudotuberculosis) - STRING interaction network
"yqjC" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yqjCannotation not available (126 aa)    
Predicted Functional Partners:
elaB_1
DUF883 domain-containing protein (101 aa)
   
   
  0.945
DJ40_3980
Conserved hypothetical protein (102 aa)
   
   
  0.766
yqjE
annotation not available (131 aa)
   
   
  0.745
DJ40_2933
annotation not available (94 aa)
   
   
  0.739
dmpI
Tautomerase; Taut- 4-oxalocrotonate tautomerase enzyme family protein (66 aa)
 
            0.734
yhjD
annotation not available (366 aa)
 
        0.729
osmY
annotation not available (204 aa)
   
        0.709
wrbA
NAD(P)H dehydrogenase (quinone); NAD(P)H-quinone oxidoreductase, type IV; flav_wrbA- NAD(P)H-quinone oxidoreductase, type IV; Belongs to the WrbA family (199 aa)
     
        0.677
DJ40_225
prkA serine kinase C-terminal domain protein (644 aa)
     
        0.675
dps
DNA protection during starvation protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co- crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction (167 aa)
     
        0.627
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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