STRINGSTRING
potA_2 protein (Yersinia pseudotuberculosis) - STRING interaction network
"potA_2" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potA_2annotation not available (355 aa)    
Predicted Functional Partners:
ydcV
annotation not available (278 aa)
 
  0.967
potB
annotation not available (288 aa)
 
 
  0.960
potC2
annotation not available (282 aa)
 
  0.621
ugpQ_1
annotation not available (276 aa)
 
        0.601
malG_1
annotation not available (283 aa)
 
  0.531
ycjP_3
annotation not available (275 aa)
      0.530
potH
annotation not available (321 aa)
 
  0.514
nagC6
annotation not available (370 aa)
         
  0.503
nagE
PTS-II-BC-nag- PTS system, N-acetylglucosamine-specific IIBC component (677 aa)
       
 
  0.496
ycjO_3
annotation not available (286 aa)
      0.485
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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