STRINGSTRING
DJ40_2961 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_2961" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_2961annotation not available (600 aa)    
Predicted Functional Partners:
DJ40_2960
Adhesin; adhes_NPXG- filamentous hemagglutinin family N-terminal domain protein (2750 aa)
          0.955
shlB_2
annotation not available (562 aa)
 
   
  0.899
DJ40_2962
Conserved hypothetical protein (129 aa)
     
      0.899
DJ40_2971
annotation not available (270 aa)
 
          0.727
shlB_3
annotation not available (562 aa)
 
   
  0.685
yapB2
Pertactin family virulence factor/autotransporter; Autotrans_barl- outer membrane autotransporter barrel domain protein (836 aa)
 
 
 
  0.680
shlB_4
annotation not available (587 aa)
 
   
  0.676
DJ40_2549
adhes_NPXG- filamentous hemagglutinin family N-terminal domain protein (463 aa)
 
          0.662
DJ40_2606
annotation not available (5813 aa)
   
   
  0.641
DJ40_1205
annotation not available (1995 aa)
 
 
  0.542
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
Server load: low (12%) [HD]