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DJ40_2971 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_2971" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_2971annotation not available (270 aa)    
Predicted Functional Partners:
DJ40_2549
adhes_NPXG- filamentous hemagglutinin family N-terminal domain protein (463 aa)
 
          0.970
fhaB_1
annotation not available (499 aa)
 
          0.908
fhaB_2
annotation not available (747 aa)
 
          0.854
shlB_2
annotation not available (562 aa)
   
  0.831
shlB_3
annotation not available (562 aa)
   
  0.827
shlB_4
annotation not available (587 aa)
   
  0.788
DJ40_2970
annotation not available (138 aa)
              0.734
DJ40_2961
annotation not available (600 aa)
 
          0.727
shlB
annotation not available (553 aa)
 
   
  0.675
tadG
annotation not available (518 aa)
 
     
  0.584
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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