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DJ40_2984 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_2984" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_2984annotation not available (633 aa)    
Predicted Functional Partners:
yiaV
Multidrug resistance protein MdtN; RND_mfp- efflux transporter, RND family, MFP subunit (349 aa)
 
 
  0.975
ttgC
Protein CyaE; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) (508 aa)
 
   
  0.969
DJ40_2986
annotation not available (108 aa)
 
          0.968
DJ40_2987
annotation not available (66 aa)
              0.845
DJ40_2184
Alpha-related fimbriae usher protein (777 aa)
   
          0.716
DJ40_2185
Alpha-related fimbriae chaperone 1; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein (228 aa)
   
          0.681
DJ40_1188
annotation not available (321 aa)
   
          0.680
sfaA
annotation not available (176 aa)
   
          0.641
fim
annotation not available (176 aa)
   
          0.608
DJ40_2267
annotation not available (425 aa)
   
          0.575
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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