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DJ40_2990 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_2990" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_2990annotation not available (145 aa)    
Predicted Functional Partners:
DJ40_2989
annotation not available (483 aa)
 
          0.844
DJ40_2988
annotation not available (410 aa)
              0.821
DJ40_2224
UPF0261 protein ERS008480_01758; Belongs to the UPF0261 family (410 aa)
 
     
  0.739
DJ40_2223
Tim-barrel signal transduction protein; Mll9387 protein (276 aa)
 
     
  0.727
DJ40_2801
annotation not available (299 aa)
   
          0.588
DJ40_2991
annotation not available (210 aa)
              0.527
yabJ
annotation not available (126 aa)
              0.519
DJ40_2225
annotation not available (249 aa)
 
     
  0.477
DJ40_3292
annotation not available (3103 aa)
   
     
  0.424
DJ40_2213
annotation not available (393 aa)
   
          0.424
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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