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DJ40_3059 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_3059" - Putative transcriptional regulator CadC in Yersinia pseudotuberculosis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_3059Putative transcriptional regulator CadC (195 aa)    
Predicted Functional Partners:
DJ40_3053
Pilus assembly protein CpaE (375 aa)
 
          0.762
DJ40_3057
annotation not available (140 aa)
 
          0.752
DJ40_3049
annotation not available (256 aa)
 
          0.746
DJ40_87
annotation not available (798 aa)
   
          0.739
bvgS
annotation not available (1330 aa)
   
          0.732
tadF
annotation not available (190 aa)
 
          0.672
rcsB_2
annotation not available (196 aa)
   
          0.663
DJ40_2185
Alpha-related fimbriae chaperone 1; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein (228 aa)
   
          0.662
pulD_2
annotation not available (439 aa)
 
          0.658
DJ40_398
annotation not available (425 aa)
   
          0.648
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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