STRINGSTRING
DJ40_3078 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_3078" - fliN: flagellar motor switch protein FliN in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_3078fliN- flagellar motor switch protein FliN (137 aa)    
Predicted Functional Partners:
DJ40_3079
annotation not available (299 aa)
 
  0.995
fliG
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (330 aa)
 
  0.995
DJ40_3083
fliG C-terminal domain protein (347 aa)
 
  0.992
DJ40_3076
fliQ- flagellar biosynthetic protein FliQ (90 aa)
 
   
  0.989
DJ40_3077
fliP- flagellar biosynthetic protein FliP (256 aa)
 
   
  0.989
DJ40_3074
flhB- flagellar biosynthetic protein FlhB (377 aa)
 
   
  0.988
DJ40_3075
fliR- flagellar biosynthetic protein FliR (257 aa)
 
 
  0.988
fliM
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (333 aa)
 
  0.987
DJ40_3073
annotation not available (698 aa)
 
 
  0.973
DJ40_3082
fliF- flagellar M-ring protein FliF (546 aa)
 
 
  0.948
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
Server load: low (11%) [HD]