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DJ40_3080 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_3080" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_3080annotation not available (342 aa)    
Predicted Functional Partners:
DJ40_3085
fliI_yscN- ATPase FliI/YscN family protein (446 aa)
 
   
  0.830
DJ40_3083
fliG C-terminal domain protein (347 aa)
 
        0.828
DJ40_3081
fliE- flagellar hook-basal body complex protein FliE (126 aa)
         
  0.822
rpoN
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (477 aa)
 
     
  0.820
DJ40_3082
fliF- flagellar M-ring protein FliF (546 aa)
         
  0.807
DJ40_3084
annotation not available (238 aa)
   
        0.801
DJ40_3086
flagell_FliJ- flagellar export protein FliJ (145 aa)
              0.793
DJ40_2587
annotation not available (851 aa)
   
 
  0.685
barA
annotation not available (939 aa)
   
 
  0.631
glnL
annotation not available (349 aa)
 
 
  0.596
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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