STRINGSTRING
DJ40_3090 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_3090" - flgB: flagellar basal-body rod protein FlgB in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_3090flgB- flagellar basal-body rod protein FlgB (148 aa)    
Predicted Functional Partners:
DJ40_3091
flgC- flagellar basal-body rod protein FlgC (141 aa)
   
  0.996
DJ40_3092
Flagellar hook capping - N-terminal region family protein (218 aa)
 
 
  0.992
DJ40_3089
flgA_cterm- flagella basal body P-ring formation protein FlgA (272 aa)
 
   
  0.988
DJ40_3094
flgF- flagellar basal-body rod protein FlgF (243 aa)
 
   
  0.986
DJ40_3095
flgG_G_neg- flagellar basal-body rod protein FlgG (261 aa)
 
   
  0.979
flgD
Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein (228 aa)
 
  0.977
DJ40_3093
flgEFG_subfam- flagellar hook-basal body family protein (401 aa)
 
   
  0.971
DJ40_3096
annotation not available (212 aa)
 
   
  0.970
flgJ
flagell_FlgJ- flagellar rod assembly protein/muramidase FlgJ (314 aa)
 
 
  0.967
fliM
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (333 aa)
 
   
  0.964
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
Server load: low (10%) [HD]