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DJ40_3094 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_3094" - flgF: flagellar basal-body rod protein FlgF in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_3094flgF- flagellar basal-body rod protein FlgF (243 aa)    
Predicted Functional Partners:
DJ40_3093
flgEFG_subfam- flagellar hook-basal body family protein (401 aa)
   
  0.990
DJ40_3091
flgC- flagellar basal-body rod protein FlgC (141 aa)
 
   
  0.987
DJ40_3090
flgB- flagellar basal-body rod protein FlgB (148 aa)
 
   
  0.986
DJ40_3096
annotation not available (212 aa)
 
 
  0.974
DJ40_3092
Flagellar hook capping - N-terminal region family protein (218 aa)
 
   
  0.973
flgJ
flagell_FlgJ- flagellar rod assembly protein/muramidase FlgJ (314 aa)
   
  0.966
DJ40_3089
flgA_cterm- flagella basal body P-ring formation protein FlgA (272 aa)
 
   
  0.963
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation (369 aa)
   
  0.953
flgD
Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein (228 aa)
 
   
  0.951
DJ40_3097
annotation not available (352 aa)
   
  0.950
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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