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DJ40_3107 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_3107" - fliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family protein in Yersinia pseudotuberculosis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_3107fliA_WhiG- RNA polymerase sigma factor, FliA/WhiG family protein (231 aa)    
Predicted Functional Partners:
DJ40_552
Anti-sigma-28 factor FlgM; flgM_jcvi- flagellar biosynthesis anti-sigma factor FlgM (100 aa)
   
  0.966
DJ40_3106
annotation not available (156 aa)
 
   
  0.965
DJ40_3091
flgC- flagellar basal-body rod protein FlgC (141 aa)
 
 
  0.937
DJ40_3108
MotA/TolQ/ExbB proton channel; motA1- flagellar motor stator protein MotA (288 aa)
 
   
  0.937
DJ40_3105
annotation not available (98 aa)
 
   
  0.935
motB_2
annotation not available (303 aa)
 
   
  0.935
DJ40_3090
flgB- flagellar basal-body rod protein FlgB (148 aa)
 
 
  0.918
DJ40_3092
Flagellar hook capping - N-terminal region family protein (218 aa)
 
   
  0.911
DJ40_3099
flgK_ends- flagellar hook-associated protein FlgK (453 aa)
 
   
  0.909
DJ40_3093
flgEFG_subfam- flagellar hook-basal body family protein (401 aa)
 
   
  0.891
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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