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DJ40_3108 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_3108" - MotA/TolQ/ExbB proton channel in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_3108MotA/TolQ/ExbB proton channel; motA1- flagellar motor stator protein MotA (288 aa)    
Predicted Functional Partners:
motB_2
annotation not available (303 aa)
 
  0.998
motB
annotation not available (427 aa)
 
  0.985
DJ40_3107
fliA_WhiG- RNA polymerase sigma factor, FliA/WhiG family protein (231 aa)
 
   
  0.937
DJ40_3106
annotation not available (156 aa)
 
   
  0.923
DJ40_3105
annotation not available (98 aa)
 
   
  0.897
cheA
annotation not available (718 aa)
   
   
  0.865
DJ40_3100
flagell_flgL- flagellar hook-associated protein 3 (307 aa)
 
   
  0.864
DJ40_3082
fliF- flagellar M-ring protein FliF (546 aa)
 
   
  0.839
DJ40_3099
flgK_ends- flagellar hook-associated protein FlgK (453 aa)
 
   
  0.831
DJ40_3096
annotation not available (212 aa)
 
   
  0.828
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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