STRINGSTRING
cirA_2 protein (Yersinia pseudotuberculosis) - STRING interaction network
"cirA_2" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cirA_2annotation not available (690 aa)    
Predicted Functional Partners:
mbtB_1
Pyochelin synthetase; AA-adenyl-dom- amino acid adenylation domain protein (1909 aa)
 
   
  0.847
msbA_1
annotation not available (585 aa)
 
   
  0.816
ampG_2
annotation not available (428 aa)
 
          0.731
fabG11
annotation not available (356 aa)
 
          0.729
mbtB_2
High molecular weight siderophore biosynthesis protein; AA-adenyl-dom- amino acid adenylation domain protein (3889 aa)
 
   
  0.728
DJ40_3150
annotation not available (590 aa)
 
   
  0.671
DJ40_3147
Yersiniabactin biosynthetic protein YbtU; Thiaz-red- thiazolinyl imide reductase family protein (375 aa)
 
     
  0.651
lgrE
annotation not available (254 aa)
 
   
  0.630
DJ40_2306
tonB_Cterm- TonB family C-terminal domain protein (267 aa)
 
 
  0.605
tonB
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (252 aa)
   
 
  0.547
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
Server load: low (10%) [HD]