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DJ40_3159 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_3159" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_3159annotation not available (439 aa)    
Predicted Functional Partners:
wapA_6
Rhs_assc_core- RHS repeat-associated core domain protein (1492 aa)
              0.816
DJ40_3158
ImpA family type VI secretion-associated protein; vgr_GE- Rhs element Vgr family protein (741 aa)
              0.761
DJ40_3161
Conserved hypothetical protein (120 aa)
              0.760
barA
annotation not available (939 aa)
     
 
  0.638
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity (622 aa)
   
 
  0.617
DJ40_2587
annotation not available (851 aa)
   
 
  0.530
arcB
annotation not available (778 aa)
     
 
  0.506
torS
annotation not available (939 aa)
     
 
  0.506
DJ40_3162
RhsD protein; Rhs_assc_core- RHS repeat-associated core domain protein (256 aa)
              0.490
DJ40_3163
annotation not available (63 aa)
              0.473
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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