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wapA_6 protein (Yersinia pseudotuberculosis) - STRING interaction network
"wapA_6" - Rhs_assc_core: RHS repeat-associated core domain protein in Yersinia pseudotuberculosis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wapA_6Rhs_assc_core- RHS repeat-associated core domain protein (1492 aa)    
Predicted Functional Partners:
DJ40_3158
ImpA family type VI secretion-associated protein; vgr_GE- Rhs element Vgr family protein (741 aa)
        0.828
DJ40_3159
annotation not available (439 aa)
              0.816
DJ40_3161
Conserved hypothetical protein (120 aa)
              0.787
DJ40_330
Sel1 domain-containing protein (703 aa)
   
          0.720
DJ40_1458
annotation not available (534 aa)
   
          0.710
DJ40_2792
Conserved hypothetical protein (152 aa)
 
          0.705
DJ40_2784
Conserved hypothetical protein (152 aa)
 
          0.705
DJ40_3855
Conserved hypothetical protein (282 aa)
   
          0.700
DJ40_1717
DUF4150 domain-containing protein (121 aa)
   
          0.694
mbtB_1
Pyochelin synthetase; AA-adenyl-dom- amino acid adenylation domain protein (1909 aa)
   
 
      0.677
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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